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- BRENDA
- Plant Proteome Database
- TreeFam
- List of MeSH codes
- DictyBase
- Munich Information Center for Protein Sequences
- EM Data Bank
- DNA Data Bank of Japan
- EcoCyc
- MetaCyc
- BioCyc database collection
- Europe PubMed Central
- MycoBank
- Plant ontology
- Cambridge Structural Database
- Domine Database
- NCI-Nature Pathway Interaction Database
- Eukaryotic Linear Motif resource
- PHOSIDA
- User:Escape Orbit/Icons
- Community Cyberinfrastructure for Advanced Microbial Ecology Research and Analysis
- ConsensusPathDB
- Interferome
- VISTA (comparative genomics)
- ExoCarta
- User:Tinkermen/Sandbox
- The Arabidopsis Information Resource
- Minimotif Miner
- CAZy
- REBASE (database)
- PlasmoDB
- MatrixDB
- Bio2RDF
- Allele Frequency Net Database
- AmoebaDB
- ArachnoServer
- AREsite
- ASD (database)
- ASPicDB
- BISC (database)
- Bovine genome database